M-Index

A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

M

magnitude() - Method in class edu.stanford.rsl.conrad.geometry.transforms.Quaternion
main(String[]) - Static method in class edu.stanford.rsl.apps.Conrad
main(String[]) - Static method in class edu.stanford.rsl.apps.gui.blobdetection.AutomaticMarkerDetectionWorker
main(String[]) - Static method in class edu.stanford.rsl.apps.gui.blobdetection.MarkerDetection
main(String[]) - Static method in class edu.stanford.rsl.apps.gui.Experimenter
main(String[]) - Static method in class edu.stanford.rsl.apps.gui.PhantomMaker
main(String[]) - Static method in class edu.stanford.rsl.apps.gui.pointselector.PointSelector
main(String[]) - Static method in class edu.stanford.rsl.apps.gui.ReconstructionPipelineFrame
main(String[]) - Static method in class edu.stanford.rsl.apps.gui.RegistryEditor
main(String[]) - Static method in class edu.stanford.rsl.apps.gui.TimeLinePlot
main(String[]) - Static method in class edu.stanford.rsl.apps.JavaDocGenerator
main(String[]) - Static method in class edu.stanford.rsl.apps.TestBob
main(String[]) - Static method in class edu.stanford.rsl.apps.Testing
main(String[]) - Static method in class edu.stanford.rsl.apps.TestJang
main(String[]) - Static method in class edu.stanford.rsl.conrad.cuda.CUDAForwardProjector: Main method checks different computation methods and compares to a reference implementation.
main(String[]) - Static method in class edu.stanford.rsl.conrad.cuda.CUDAForwardProjectorWithMotion: Main method checks different computation methods and compares to a reference implementation.
main(String[]) - Static method in class edu.stanford.rsl.conrad.cuda.ImagePlusVolumeRenderer: Entry point for this sample.
main(String[]) - Static method in class edu.stanford.rsl.conrad.cuda.JCudaDriverTextureSample: Entry point for this sample.
main(String[]) - Static method in class edu.stanford.rsl.conrad.cuda.JCudaRuntimeSample
main(String[]) - Static method in class edu.stanford.rsl.conrad.data.Complex
main(String[]) - Static method in class edu.stanford.rsl.conrad.data.Grid2DComplex
main(String[]) - Static method in class edu.stanford.rsl.conrad.data.iterators.FloatIterator
main(String[]) - Static method in class edu.stanford.rsl.conrad.data.iterators.PointwiseIterator
main(String[]) - Static method in class edu.stanford.rsl.conrad.filtering.FastRadialSymmetryTool
main(String[]) - Static method in class edu.stanford.rsl.conrad.geometry.motion.timewarp.ConstantTimeWarper
main(String[]) - Static method in class edu.stanford.rsl.conrad.geometry.motion.timewarp.DualPhasePeriodicTimeWarper
main(String[]) - Static method in class edu.stanford.rsl.conrad.geometry.motion.timewarp.HarmonicTimeWarper
main(String[]) - Static method in class edu.stanford.rsl.conrad.geometry.motion.timewarp.PeriodicTimeWarper
main(String[]) - Static method in class edu.stanford.rsl.conrad.geometry.motion.timewarp.RestPhaseTimeWarper
main(String[]) - Static method in class edu.stanford.rsl.conrad.geometry.motion.timewarp.SigmoidTimeWarper
main(String[]) - Static method in class edu.stanford.rsl.conrad.geometry.motion.WeightBearingBeadPositionBuilder
main(String[]) - Static method in class edu.stanford.rsl.conrad.geometry.splines.SplineTests
main() - Method in class edu.stanford.rsl.conrad.geometry.transforms.test.TestAffineTransform
main() - Method in class edu.stanford.rsl.conrad.geometry.transforms.test.TestScaleRotate
main() - Method in class edu.stanford.rsl.conrad.geometry.transforms.test.TestTranslation
main(String[]) - Static method in class edu.stanford.rsl.conrad.io.MotionFieldReader
main(String[]) - Static method in class edu.stanford.rsl.conrad.io.STLFileUtil
main(String[]) - Static method in class edu.stanford.rsl.conrad.numerics.test.TestExpressions
main(String[]) - Static method in class edu.stanford.rsl.conrad.opencl.GLCLDemo.GLCLInteroperabilityDemo
main(String[]) - Static method in class edu.stanford.rsl.conrad.opencl.OpenCLForwardProjector: Main method checks different computation methods and compares to a reference implementation.
main(String[]) - Static method in class edu.stanford.rsl.conrad.opencl.OpenCLForwardProjectorWithMotion: Main method checks different computation methods and compares to a reference implementation.
main(String[]) - Static method in class edu.stanford.rsl.conrad.opencl.rendering.OpenCLTextureRendering: Entry point for this sample.
main(String[]) - Static method in class edu.stanford.rsl.conrad.opencl.rendering.OpenCLVolumeRenderer: Entry point for this sample.
main(String[]) - Static method in class edu.stanford.rsl.conrad.phantom.xcat.ViconAffineTransform
main(String[]) - Static method in class edu.stanford.rsl.conrad.phantom.xcat.XCatMetricPhantomCreator
main(String[]) - Static method in class edu.stanford.rsl.conrad.physics.materials.database.xmldatagenerators.RebuildDatabase
main(String[]) - Static method in class edu.stanford.rsl.conrad.physics.materials.database.xmldatagenerators.RebuildMaps: Entry point of map database rebuilding program.
main(String[]) - Static method in class edu.stanford.rsl.conrad.physics.materials.database.xmldatagenerators.RebuildMaterialDatabase
main(String[]) - Static method in class edu.stanford.rsl.conrad.physics.materials.materialsTest.TestMassAttenuationData
main(String[]) - Static method in class edu.stanford.rsl.conrad.physics.XRaySpectrum
main(String[]) - Static method in class edu.stanford.rsl.conrad.reconstruction.test.IterativeReconstructionTestA
main(String[]) - Static method in class edu.stanford.rsl.conrad.reconstruction.test.IterativeReconstructionTestB
main(String[]) - Static method in class edu.stanford.rsl.conrad.utils.BilinearInterpolatingDoubleArray: Code for testing using CONRAD Software package.
main(String[]) - Static method in class edu.stanford.rsl.conrad.utils.FileJoiner
main(String[]) - Static method in class edu.stanford.rsl.conrad.utils.StatisticsUtil
main(String[]) - Static method in class edu.stanford.rsl.tutorial.atract.AtractExample
main(String[]) - Static method in class edu.stanford.rsl.tutorial.atract.AtractKernel1D
main(String[]) - Static method in class edu.stanford.rsl.tutorial.atract.AtractKernel1D_test
main(String[]) - Static method in class edu.stanford.rsl.tutorial.atract.AtractKernel2D
main(String[]) - Static method in class edu.stanford.rsl.tutorial.atract.AtractWithBinaryWeight
main(String[]) - Static method in class edu.stanford.rsl.tutorial.atract.DisplayAtract
main(String[]) - Static method in class edu.stanford.rsl.tutorial.atract.LaplaceKernel1D
main(String[]) - Static method in class edu.stanford.rsl.tutorial.atract.LaplaceKernel2D
main(String[]) - Static method in class edu.stanford.rsl.tutorial.cone.ConeBeamReconstructionExample
main(String[]) - Static method in class edu.stanford.rsl.tutorial.DerivativeKernel
main(String[]) - Static method in class edu.stanford.rsl.tutorial.DisplayReconstruction
main(String[]) - Static method in class edu.stanford.rsl.tutorial.DisplaySinogram
main(String[]) - Static method in class edu.stanford.rsl.tutorial.DisplayUniformCircle
main(String[]) - Static method in class edu.stanford.rsl.tutorial.fan.CosineFilter
main(String[]) - Static method in class edu.stanford.rsl.tutorial.fan.dynamicCollimation.copyRedundantData
main(String[]) - Static method in class edu.stanford.rsl.tutorial.fan.FanBeamComparisonToCONRAD
main(String[]) - Static method in class edu.stanford.rsl.tutorial.fan.FanBeamReconstructionExample
main(String[]) - Static method in class edu.stanford.rsl.tutorial.fan.redundancy.BinaryWeights
main(String[]) - Static method in class edu.stanford.rsl.tutorial.fan.redundancy.BinaryWeights_erodeByOne
main(String[]) - Static method in class edu.stanford.rsl.tutorial.fan.redundancy.BinaryWeights_Normal
main(String[]) - Static method in class edu.stanford.rsl.tutorial.fan.redundancy.CompensationWeights
main(String[]) - Static method in class edu.stanford.rsl.tutorial.fan.redundancy.FanBeamWeightingComparison
main(String[]) - Static method in class edu.stanford.rsl.tutorial.fan.redundancy.ParkerWeights
main(String[]) - Static method in class edu.stanford.rsl.tutorial.fan.redundancy.SilverWeights
main(String[]) - Static method in class edu.stanford.rsl.tutorial.FanBeamParallelBeamComparison
main(String[]) - Static method in class edu.stanford.rsl.tutorial.HilbertKernel
main(String[]) - Static method in class edu.stanford.rsl.tutorial.motionEstimation.CylinderVolumeMask
main(String[]) - Static method in class edu.stanford.rsl.tutorial.motionEstimation.EstimateBSplineSurface
main(String[]) - Static method in class edu.stanford.rsl.tutorial.motionEstimation.InitialOptimization
main(String[]) - Static method in class edu.stanford.rsl.tutorial.motionEstimation.OpenCLSplineRenderer
main(String[]) - Static method in class edu.stanford.rsl.tutorial.motionEstimation.RadialBasisFunctionInterpolation
main(String[]) - Static method in class edu.stanford.rsl.tutorial.motionEstimation.RunMotionEstimation
main(String[]) - Static method in class edu.stanford.rsl.tutorial.motionEstimation.SmoothKernel1D
main(String[]) - Static method in class edu.stanford.rsl.tutorial.motionEstimation.SobelKernel1D
main(String[]) - Static method in class edu.stanford.rsl.tutorial.motionEstimation.ThinPlateSplineInterpolation
main(String[]) - Static method in class edu.stanford.rsl.tutorial.parallel.ParallelReconExample
main(String[]) - Static method in class edu.stanford.rsl.tutorial.phantoms.MTFphantom
main(String[]) - Static method in class edu.stanford.rsl.tutorial.phantoms.SheppLogan
main(String[]) - Static method in class edu.stanford.rsl.tutorial.RamLakFilteringExample
main(String[]) - Static method in class edu.stanford.rsl.tutorial.RamLakKernel
main(String[]) - Static method in class edu.stanford.rsl.tutorial.truncation.ConstantValueZeroArtifactImage
main(String[]) - Static method in class edu.stanford.rsl.tutorial.truncation.NonZeroArtifactImage
main(String[]) - Static method in class edu.stanford.rsl.tutorial.truncation.WaterCylinderFBPExample
makeComplex(Volume3D) - Method in class edu.stanford.rsl.conrad.cuda.CUDAVolumeOperator
makeComplex(Volume3D) - Method in class edu.stanford.rsl.conrad.volume3d.ParallelVolumeOperator
makeComplex(Volume3D) - Method in class edu.stanford.rsl.conrad.volume3d.VolumeOperator: Makes the volume complex, i.e.
makeDetachedHeader(FileInfo, Calibration, boolean) - Static method in class edu.stanford.rsl.conrad.io.Nrrd_Writer
makeHeader(FileInfo, Calibration) - Static method in class edu.stanford.rsl.conrad.io.Nrrd_Writer
map - Static variable in class edu.stanford.rsl.conrad.physics.materials.database.FormulaToNameMap
map - Static variable in class edu.stanford.rsl.conrad.physics.materials.database.NameToFormulaMap
MAPPED - Static variable in class edu.stanford.rsl.apps.gui.blobdetection.ConnectedComponent3D: Particle joining method
MarkerDetection - Class in edu.stanford.rsl.apps.gui.blobdetection: This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
MarkerDetection() - Constructor for class edu.stanford.rsl.apps.gui.blobdetection.MarkerDetection
MarkerDetectionWorker - Class in edu.stanford.rsl.apps.gui.blobdetection
MarkerDetectionWorker() - Constructor for class edu.stanford.rsl.apps.gui.blobdetection.MarkerDetectionWorker
MarkerDetectionWorker(ArrayList<ArrayList<double[]>>) - Constructor for class edu.stanford.rsl.apps.gui.blobdetection.MarkerDetectionWorker
Material - Class in edu.stanford.rsl.conrad.physics.materials: This class models an arbitrary material.
Material() - Constructor for class edu.stanford.rsl.conrad.physics.materials.Material
Material(double) - Constructor for class edu.stanford.rsl.conrad.physics.materials.Material: Initializes a material with a given density.
MaterialsDB - Class in edu.stanford.rsl.conrad.physics.materials.database: The material database provides access to materials commonly used in medical physics.
MaterialsDB() - Constructor for class edu.stanford.rsl.conrad.physics.materials.database.MaterialsDB
MaterialUtils - Class in edu.stanford.rsl.conrad.physics.materials.utils: This class contains methods for generating custom materials, calculating energy dependent mass attenuation,
and determining the energy dependent attenuation coefficient of a material given its density, and energy dependent mass attenuation.
MaterialUtils() - Constructor for class edu.stanford.rsl.conrad.physics.materials.utils.MaterialUtils
MathExpression - Class in edu.stanford.rsl.conrad.numerics.mathexpressions: A wrapper class of mathematical expressions
MathExpression(String) - Constructor for class edu.stanford.rsl.conrad.numerics.mathexpressions.MathExpression
max(Volume3D) - Method in class edu.stanford.rsl.conrad.cuda.CUDAVolumeOperator
max(Grid) - Static method in class edu.stanford.rsl.conrad.data.PointwiseOperators: Get max of a Grid
MAX - Static variable in class edu.stanford.rsl.conrad.filtering.ExtremeValueTruncationFilter
max(double) - Method in class edu.stanford.rsl.conrad.io.SerializableFloatProcessor
max(SimpleVector...) - Static method in class edu.stanford.rsl.conrad.numerics.SimpleOperators: Computes and returns the element-wise maximum of all given vectors.
max(SimpleMatrix...) - Static method in class edu.stanford.rsl.conrad.numerics.SimpleOperators: Computes and returns the element-wise maximum of all given matrices.
max() - Method in class edu.stanford.rsl.conrad.numerics.SimpleVector
max(Volume3D) - Method in class edu.stanford.rsl.conrad.volume3d.ParallelVolumeOperator
max(Volume3D) - Method in class edu.stanford.rsl.conrad.volume3d.VolumeOperator: Determines the maximum intensity of a pixel in the given volume.
MAX_DIM - Static variable in class edu.stanford.rsl.conrad.volume3d.Volume3D
MAX_FILTERS - Static variable in class edu.stanford.rsl.conrad.filtering.multiprojection.anisotropic.AnisotropicFilterFunction
MAX_THREADS - Static variable in class edu.stanford.rsl.conrad.utils.RegKeys: Registry entry to limit the number threads being used in the parallel processing.
The value of this key is interpreted as int and denotes the maximal number of threads.
MaxEigenValue - Class in edu.stanford.rsl.conrad.volume3d
MaxEigenValue(int) - Constructor for class edu.stanford.rsl.conrad.volume3d.MaxEigenValue
MaxOfSlab - Class in edu.stanford.rsl.conrad.volume3d.operations
MaxOfSlab() - Constructor for class edu.stanford.rsl.conrad.volume3d.operations.MaxOfSlab
maxValue() - Method in class edu.stanford.rsl.conrad.io.SerializableFloatProcessor: Returns the largest possible positive finite pixel value.
mean(Volume3D) - Method in class edu.stanford.rsl.conrad.cuda.CUDAVolumeOperator
mean(Grid) - Static method in class edu.stanford.rsl.conrad.data.PointwiseOperators
mean(Volume3D) - Method in class edu.stanford.rsl.conrad.volume3d.ParallelVolumeOperator
mean(Volume3D) - Method in class edu.stanford.rsl.conrad.volume3d.VolumeOperator: Determines the arithmetic average $%preamble{\usepackage{amsmath}} $\mu$$ of all $%preamble{\usepackage{amsmath}} $N = \prod_i d_i$$ voxels $%preamble{\usepackage{amsmath}} $x_j$$ .
meanFilter(double[], int) - Static method in class edu.stanford.rsl.conrad.utils.DoubleArrayUtil: Performs mean filtering of the array.
meanFilter(float[], int) - Static method in class edu.stanford.rsl.conrad.utils.FloatArrayUtil: Performs mean filtering of the array.
MeanFilteringTool - Class in edu.stanford.rsl.conrad.filtering
MeanFilteringTool() - Constructor for class edu.stanford.rsl.conrad.filtering.MeanFilteringTool
MeanMarkerBasedProjectionShiftingTool - Class in edu.stanford.rsl.conrad.filtering
MeanMarkerBasedProjectionShiftingTool() - Constructor for class edu.stanford.rsl.conrad.filtering.MeanMarkerBasedProjectionShiftingTool
MeanMarkerBasedProjectionShiftingToolForXCAT - Class in edu.stanford.rsl.conrad.filtering
MeanMarkerBasedProjectionShiftingToolForXCAT() - Constructor for class edu.stanford.rsl.conrad.filtering.MeanMarkerBasedProjectionShiftingToolForXCAT
MeanOfSlab - Class in edu.stanford.rsl.conrad.volume3d.operations
MeanOfSlab() - Constructor for class edu.stanford.rsl.conrad.volume3d.operations.MeanOfSlab
MeanSquareErrorMetric - Class in edu.stanford.rsl.conrad.metric
MeanSquareErrorMetric() - Constructor for class edu.stanford.rsl.conrad.metric.MeanSquareErrorMetric
Measure2DBeadMTFAngularRange - Class in edu.stanford.rsl.apps.gui.roi
Measure2DBeadMTFAngularRange() - Constructor for class edu.stanford.rsl.apps.gui.roi.Measure2DBeadMTFAngularRange
Measure2DBeadMTFMultiDirection - Class in edu.stanford.rsl.apps.gui.roi
Measure2DBeadMTFMultiDirection() - Constructor for class edu.stanford.rsl.apps.gui.roi.Measure2DBeadMTFMultiDirection
Measure3DBeadMTF - Class in edu.stanford.rsl.apps.gui.roi
Measure3DBeadMTF() - Constructor for class edu.stanford.rsl.apps.gui.roi.Measure3DBeadMTF
MeasureEdgeMTF - Class in edu.stanford.rsl.apps.gui.roi
MeasureEdgeMTF() - Constructor for class edu.stanford.rsl.apps.gui.roi.MeasureEdgeMTF
MeasureInlayMTF - Class in edu.stanford.rsl.apps.gui.roi
MeasureInlayMTF() - Constructor for class edu.stanford.rsl.apps.gui.roi.MeasureInlayMTF
MeasureMTFDroege - Class in edu.stanford.rsl.apps.gui.roi: Measures the MTF after Droege et al.
MeasureMTFDroege() - Constructor for class edu.stanford.rsl.apps.gui.roi.MeasureMTFDroege
MeasureNoise - Class in edu.stanford.rsl.apps.gui.roi
MeasureNoise() - Constructor for class edu.stanford.rsl.apps.gui.roi.MeasureNoise
MeasurePatternMTF - Class in edu.stanford.rsl.apps.gui.roi: Measures the MTF at a regular inlay pattern.
MeasurePatternMTF() - Constructor for class edu.stanford.rsl.apps.gui.roi.MeasurePatternMTF
MeasurePDS2BeadAccuracy - Class in edu.stanford.rsl.apps.gui.roi: Class to measure the accuracy of the reconstruction of a PDS2 Phantom in terms of bead positions.
MeasurePDS2BeadAccuracy() - Constructor for class edu.stanford.rsl.apps.gui.roi.MeasurePDS2BeadAccuracy
MeasureSlantMTF - Class in edu.stanford.rsl.apps.gui.roi: Estimate the pre-sampled (pre-pixelated) MTF of an X-ray detector if a slanted edge is used.
MeasureSlantMTF() - Constructor for class edu.stanford.rsl.apps.gui.roi.MeasureSlantMTF
medianFilter() - Method in class edu.stanford.rsl.conrad.io.SerializableFloatProcessor: Not implemented.
MedianFilteringTool - Class in edu.stanford.rsl.conrad.filtering: Implements a simple median filter based on sorting of all values in the kernel.
MedianFilteringTool() - Constructor for class edu.stanford.rsl.conrad.filtering.MedianFilteringTool
MEDLINE_CITATION_FORMAT - Static variable in class edu.stanford.rsl.conrad.utils.Configuration
MetricPhantomRenderer - Class in edu.stanford.rsl.conrad.phantom.renderer
MetricPhantomRenderer() - Constructor for class edu.stanford.rsl.conrad.phantom.renderer.MetricPhantomRenderer
MickeyMouseGrid2D - Class in edu.stanford.rsl.tutorial.phantoms
MickeyMouseGrid2D(int, int) - Constructor for class edu.stanford.rsl.tutorial.phantoms.MickeyMouseGrid2D
min(Volume3D) - Method in class edu.stanford.rsl.conrad.cuda.CUDAVolumeOperator
min(Grid) - Static method in class edu.stanford.rsl.conrad.data.PointwiseOperators: Get min of a Grid
MIN - Static variable in class edu.stanford.rsl.conrad.filtering.ExtremeValueTruncationFilter
min(double) - Method in class edu.stanford.rsl.conrad.io.SerializableFloatProcessor
min(SimpleVector...) - Static method in class edu.stanford.rsl.conrad.numerics.SimpleOperators: Computes and returns the element-wise minimum of all given vectors.
min(SimpleMatrix...) - Static method in class edu.stanford.rsl.conrad.numerics.SimpleOperators: Computes and returns the element-wise minimum of all given matrices.
min() - Method in class edu.stanford.rsl.conrad.numerics.SimpleVector
min(double[], double) - Static method in class edu.stanford.rsl.conrad.utils.DoubleArrayUtil
min(float[], float) - Static method in class edu.stanford.rsl.conrad.utils.FloatArrayUtil
min(Volume3D) - Method in class edu.stanford.rsl.conrad.volume3d.ParallelVolumeOperator
min(Volume3D) - Method in class edu.stanford.rsl.conrad.volume3d.VolumeOperator: Determines the minimum intensity of the volume.
minAndMaxOfArray(double[]) - Static method in class edu.stanford.rsl.conrad.utils.DoubleArrayUtil: Returns the minimal and the maximal value in a given array
minAndMaxOfArray(float[]) - Static method in class edu.stanford.rsl.conrad.utils.FloatArrayUtil: Returns the minimal and the maximal value in a given array
minAndMaxOfImageProcessor(ImageProcessor) - Static method in class edu.stanford.rsl.conrad.utils.ImageUtil: returns the minimal and the maxiaml value of a given ImageProcessor
minAndMaxOfImageProcessor(ImagePlus) - Static method in class edu.stanford.rsl.conrad.utils.ImageUtil: returns the minimal and the maxiaml value of a given ImageProcessor
minOfArray(double[]) - Static method in class edu.stanford.rsl.conrad.utils.DoubleArrayUtil: Returns the minimal value in a given array
minOfArray(float[]) - Static method in class edu.stanford.rsl.conrad.utils.FloatArrayUtil: Returns the minimal value in a given array
minOfImagePlusValues(ImagePlus) - Static method in class edu.stanford.rsl.conrad.utils.ImageUtil: Determines the minimal value of a given ImagePlus.
minOfImageProcessor(ImageProcessor) - Static method in class edu.stanford.rsl.conrad.utils.ImageUtil: returns the minimal value of a given ImageProcessor
MinOfSlab - Class in edu.stanford.rsl.conrad.volume3d.operations
MinOfSlab() - Constructor for class edu.stanford.rsl.conrad.volume3d.operations.MinOfSlab
MinOfSlabs - Class in edu.stanford.rsl.conrad.volume3d.operations
MinOfSlabs() - Constructor for class edu.stanford.rsl.conrad.volume3d.operations.MinOfSlabs
minOfTwoVolumes(Volume3D, Volume3D) - Method in class edu.stanford.rsl.conrad.cuda.CUDAVolumeOperator
minOfTwoVolumes(Volume3D, Volume3D) - Method in class edu.stanford.rsl.conrad.volume3d.ParallelVolumeOperator
minOfTwoVolumes(Volume3D, Volume3D) - Method in class edu.stanford.rsl.conrad.volume3d.VolumeOperator: Determines the minimal volume element by element.
The output is stored in the first volume.
minValue() - Method in class edu.stanford.rsl.conrad.io.SerializableFloatProcessor: Returns the smallest possible positive nonzero pixel value.
MixedSurfaceBSplineMotionField - Class in edu.stanford.rsl.conrad.geometry.motion
MixedSurfaceBSplineMotionField(ArrayList<TimeVariantSurfaceBSpline>, ArrayList<SurfaceBSpline>, double) - Constructor for class edu.stanford.rsl.conrad.geometry.motion.MixedSurfaceBSplineMotionField
Mixture - Class in edu.stanford.rsl.conrad.physics.materials: Class to model a mixture of elements
Mixture() - Constructor for class edu.stanford.rsl.conrad.physics.materials.Mixture
Mo_A - Static variable in class edu.stanford.rsl.conrad.physics.Constants: atomic weight, molybdenum (g/mol)
Mo_K - Static variable in class edu.stanford.rsl.conrad.physics.Constants: molybdenum K-edge (keV)
Mo_Ka1 - Static variable in class edu.stanford.rsl.conrad.physics.Constants: molybdenum K-alpha 1 line
Mo_Ka1_f - Static variable in class edu.stanford.rsl.conrad.physics.Constants: molybdenum K-alpha 1 line
fluorescent yield
Mo_Ka2 - Static variable in class edu.stanford.rsl.conrad.physics.Constants: molybdenum K-alpha 2 line
Mo_Ka2_f - Static variable in class edu.stanford.rsl.conrad.physics.Constants: molybdenum K-alpha 2 line
fluorescent yield
Mo_Kb1 - Static variable in class edu.stanford.rsl.conrad.physics.Constants: molybdenum K-beta 1 line
Mo_Kb1_f - Static variable in class edu.stanford.rsl.conrad.physics.Constants: molybdenum K-beta 1 line
fluorescent yield
Mo_Kb2 - Static variable in class edu.stanford.rsl.conrad.physics.Constants: molybdenum K-beta 2 line
Mo_Kb2_f - Static variable in class edu.stanford.rsl.conrad.physics.Constants: molybdenum K-beta 2 line
fluorescent yield
Mo_mdensity - Static variable in class edu.stanford.rsl.conrad.physics.Constants: molybdenum mass density
Mo_Z - Static variable in class edu.stanford.rsl.conrad.physics.Constants: atomic number, molybdenum
MoC2 - Static variable in class edu.stanford.rsl.conrad.physics.Constants: electron rest mass (keV)
ModelBasedIterativeReconstruction - Class in edu.stanford.rsl.conrad.reconstruction.iterative
ModelBasedIterativeReconstruction(Trajectory) - Constructor for class edu.stanford.rsl.conrad.reconstruction.iterative.ModelBasedIterativeReconstruction
ModelBasedIterativeReconstruction - Class in edu.stanford.rsl.conrad.reconstruction
ModelBasedIterativeReconstruction(Trajectory) - Constructor for class edu.stanford.rsl.conrad.reconstruction.ModelBasedIterativeReconstruction
MonochromaticAbsorptionModel - Class in edu.stanford.rsl.conrad.physics.absorption: Creates a absorption model for monochromatic projections
MonochromaticAbsorptionModel() - Constructor for class edu.stanford.rsl.conrad.physics.absorption.MonochromaticAbsorptionModel
MotionCompensatedSubVolumeBackprojector - Class in edu.stanford.rsl.conrad.reconstruction: This FBP-based mathod splits the reconstruction volume into sub volumes which can be processed in parallel to speed up the reconstruction further.
MotionCompensatedSubVolumeBackprojector() - Constructor for class edu.stanford.rsl.conrad.reconstruction.MotionCompensatedSubVolumeBackprojector
MotionCompensatedVOIBasedReconstructionFilter - Class in edu.stanford.rsl.conrad.reconstruction: The VOIBasedReconstructionFilter is an implementation of the backprojection which employs a volume-of-interest (VOI) to speed up reconstruction.
MotionCompensatedVOIBasedReconstructionFilter() - Constructor for class edu.stanford.rsl.conrad.reconstruction.MotionCompensatedVOIBasedReconstructionFilter
MotionDefectTimeVariantSurfaceBSpline - Class in edu.stanford.rsl.conrad.geometry.splines
MotionDefectTimeVariantSurfaceBSpline(ArrayList<SurfaceBSpline>, PointND, PointND) - Constructor for class edu.stanford.rsl.conrad.geometry.splines.MotionDefectTimeVariantSurfaceBSpline
MotionField - Interface in edu.stanford.rsl.conrad.geometry.motion
MotionFieldReader - Class in edu.stanford.rsl.conrad.io
MotionFieldReader() - Constructor for class edu.stanford.rsl.conrad.io.MotionFieldReader
MotionUtil - Class in edu.stanford.rsl.conrad.geometry.motion
MotionUtil() - Constructor for class edu.stanford.rsl.conrad.geometry.motion.MotionUtil
mouseClicked(MouseEvent) - Method in class edu.stanford.rsl.apps.gui.ConfigurePipelineFrame
mouseClicked(MouseEvent) - Method in class edu.stanford.rsl.apps.gui.Experimenter
MouseControl - Class in edu.stanford.rsl.conrad.cuda: Inner class encapsulating the MouseMotionListener and MouseWheelListener for the interaction
MouseControl(MouseControlable) - Constructor for class edu.stanford.rsl.conrad.cuda.MouseControl
MouseControl - Class in edu.stanford.rsl.conrad.opencl.rendering: Inner class encapsulating the MouseMotionListener and MouseWheelListener for the interaction
MouseControl(MouseControlable) - Constructor for class edu.stanford.rsl.conrad.opencl.rendering.MouseControl
MouseControlable - Interface in edu.stanford.rsl.conrad.cuda
MouseControlable - Interface in edu.stanford.rsl.conrad.opencl.rendering
mouseDragged(MouseEvent) - Method in class edu.stanford.rsl.conrad.cuda.MouseControl
mouseDragged(MouseEvent) - Method in class edu.stanford.rsl.conrad.opencl.rendering.MouseControl
mouseEntered(MouseEvent) - Method in class edu.stanford.rsl.apps.gui.ConfigurePipelineFrame
mouseEntered(MouseEvent) - Method in class edu.stanford.rsl.apps.gui.Experimenter
mouseExited(MouseEvent) - Method in class edu.stanford.rsl.apps.gui.ConfigurePipelineFrame
mouseExited(MouseEvent) - Method in class edu.stanford.rsl.apps.gui.Experimenter
mouseMoved(MouseEvent) - Method in class edu.stanford.rsl.conrad.cuda.MouseControl
mouseMoved(MouseEvent) - Method in class edu.stanford.rsl.conrad.opencl.rendering.MouseControl
mousePressed(MouseEvent) - Method in class edu.stanford.rsl.apps.gui.ConfigurePipelineFrame
mousePressed(MouseEvent) - Method in class edu.stanford.rsl.apps.gui.Experimenter
mouseReleased(MouseEvent) - Method in class edu.stanford.rsl.apps.gui.ConfigurePipelineFrame
mouseReleased(MouseEvent) - Method in class edu.stanford.rsl.apps.gui.Experimenter
mouseWheelMoved(MouseWheelEvent) - Method in class edu.stanford.rsl.conrad.cuda.MouseControl
mouseWheelMoved(MouseWheelEvent) - Method in class edu.stanford.rsl.conrad.opencl.rendering.MouseControl
moveToDevice(Volume3D, CUdeviceptr) - Static method in class edu.stanford.rsl.conrad.cuda.CUDAUtil: Moves the volume to the device.
MovingBallPhantom - Class in edu.stanford.rsl.conrad.phantom: A simple 4D phantom similar to a swinging pendulum - spherical version.
MovingBallPhantom() - Constructor for class edu.stanford.rsl.conrad.phantom.MovingBallPhantom
MovingCenterRotationMotionField - Class in edu.stanford.rsl.conrad.geometry.motion
MovingCenterRotationMotionField(PointND, MotionField, SimpleVector, double) - Constructor for class edu.stanford.rsl.conrad.geometry.motion.MovingCenterRotationMotionField
MSP(String, double[]) - Static method in class edu.stanford.rsl.conrad.physics.XRaySpectrum: Ref 1 Eq 16 Returns mass stopping power term for specified material and electron energy T
MTFBeadPhantom - Class in edu.stanford.rsl.conrad.phantom: MTF phantom defined by Lars Wigstroem.
MTFBeadPhantom() - Constructor for class edu.stanford.rsl.conrad.phantom.MTFBeadPhantom: Construtor which creates the phnatom.
MTFphantom - Class in edu.stanford.rsl.tutorial.phantoms: Creates an MTF phantom with five high density beads in a homogeneous cylinder
MTFphantom(int, int, double, double, float, float) - Constructor for class edu.stanford.rsl.tutorial.phantoms.MTFphantom: The constructor takes two arguments to initialize the grid.
mu(double[], String) - Static method in class edu.stanford.rsl.conrad.physics.XRaySpectrum: Returns the mass attenuation coef for the selected material at energy E.
mul(Complex) - Method in class edu.stanford.rsl.conrad.data.Complex
mul(double) - Method in class edu.stanford.rsl.conrad.data.Complex
MULTI - Static variable in class edu.stanford.rsl.apps.gui.blobdetection.ConnectedComponent3D: Particle joining method
multipliedBy(Grid, Grid) - Static method in class edu.stanford.rsl.conrad.data.PointwiseOperators
multipliedBy(Quaternion) - Method in class edu.stanford.rsl.conrad.geometry.transforms.Quaternion
multipliedBy(double) - Method in class edu.stanford.rsl.conrad.numerics.SimpleMatrix: Multiply factor to all entries in matrix [current matrix is not updated]
multipliedBy(double) - Method in class edu.stanford.rsl.conrad.numerics.SimpleVector: Returns a scaled instance of the vector.
multiply(Volume3D, Volume3D) - Method in class edu.stanford.rsl.conrad.cuda.CUDAVolumeOperator
MULTIPLY - Static variable in class edu.stanford.rsl.conrad.filtering.ImageConstantMathFilter
MULTIPLY - Static variable in class edu.stanford.rsl.conrad.filtering.ImageMathFilter
multiply(double) - Method in class edu.stanford.rsl.conrad.io.SerializableFloatProcessor
multiply(SimpleMatrix, SimpleVector) - Static method in class edu.stanford.rsl.conrad.numerics.SimpleOperators: Performs a standard matrix-vector product.
multiply(SimpleVector, SimpleMatrix) - Static method in class edu.stanford.rsl.conrad.numerics.SimpleOperators: Performs a vector-matrix product, assuming a row vector.
multiply(double[], double) - Static method in class edu.stanford.rsl.conrad.utils.DoubleArrayUtil: Multiplies all entries of array by factor.
multiply(double[], double[]) - Static method in class edu.stanford.rsl.conrad.utils.DoubleArrayUtil: Multiplies all entries of the two arrays element by element.
Works in place and overwrites array.
multiply(float[], float) - Static method in class edu.stanford.rsl.conrad.utils.FloatArrayUtil: Multiplies all entries of array by factor.
multiply(float[], float[]) - Static method in class edu.stanford.rsl.conrad.utils.FloatArrayUtil: Multiplies all entries of the two arrays element by element.
Works in place and overwrites array.
multiply(Volume3D, Volume3D) - Method in class edu.stanford.rsl.conrad.volume3d.ParallelVolumeOperator
multiply(Volume3D, Volume3D) - Method in class edu.stanford.rsl.conrad.volume3d.VolumeOperator: Multiplies two volumes element by element.
multiplyAbsolute(double[], double[]) - Static method in class edu.stanford.rsl.conrad.utils.FFTUtil: Multiplies two arrays of complex numbers.
multiplyAtIndex(int, float) - Method in class edu.stanford.rsl.conrad.data.Grid1D
multiplyAtIndex(int, float) - Method in class edu.stanford.rsl.conrad.data.Grid1DComplex
multiplyAtIndex(int, float, float) - Method in class edu.stanford.rsl.conrad.data.Grid1DComplex
multiplyAtIndex(int, int, float) - Method in class edu.stanford.rsl.conrad.data.Grid2D
multiplyAtIndex(int, int, float) - Method in class edu.stanford.rsl.conrad.data.Grid2DComplex
multiplyAtIndex(int, int, float, float) - Method in class edu.stanford.rsl.conrad.data.Grid2DComplex
multiplyAtIndex(int, int, int, float) - Method in class edu.stanford.rsl.conrad.data.Grid3D
multiplyBy(Grid, Grid) - Static method in class edu.stanford.rsl.conrad.data.PointwiseOperators
multiplyBy(Grid, float) - Static method in class edu.stanford.rsl.conrad.data.PointwiseOperators: Compute grid = grid * a
multiplyBy(Quaternion) - Method in class edu.stanford.rsl.conrad.geometry.transforms.Quaternion
multiplyBy(double) - Method in class edu.stanford.rsl.conrad.numerics.SimpleMatrix: Multiply factor to all entries in matrix in place
multiplyBy(double) - Method in class edu.stanford.rsl.conrad.numerics.SimpleVector
multiplyComplex(double, double, double, double) - Static method in class edu.stanford.rsl.conrad.utils.FFTUtil: Multiplies two complex values
multiplyComplex(double[], double[]) - Static method in class edu.stanford.rsl.conrad.utils.FFTUtil: Multiplies two arrays of complex numbers pairwise
multiplyElementBy(int, int, double) - Method in class edu.stanford.rsl.conrad.numerics.SimpleMatrix: Multiply factor to entry at [row,col] in place
multiplyElementBy(int, double) - Method in class edu.stanford.rsl.conrad.numerics.SimpleVector
multiplyElementWise(SimpleVector...) - Static method in class edu.stanford.rsl.conrad.numerics.SimpleOperators: Multiplies the supplied vectors element wise
multiplyElementWise(SimpleMatrix...) - Static method in class edu.stanford.rsl.conrad.numerics.SimpleOperators
multiplyElementWiseBy(SimpleMatrix) - Method in class edu.stanford.rsl.conrad.numerics.SimpleMatrix: ordered multiplication of matrix entries in place
multiplyElementWiseBy(SimpleVector...) - Method in class edu.stanford.rsl.conrad.numerics.SimpleVector
multiplyImagePlusValues(ImagePlus, double) - Static method in class edu.stanford.rsl.conrad.utils.ImageUtil: Multiplies the pixel values of all pixels in the ImagePlus by value
multiplyImages(ImagePlus, ImagePlus, int) - Static method in class edu.stanford.rsl.conrad.utils.ImageUtil
multiplyImages(ImageProcessor, ImageProcessor) - Static method in class edu.stanford.rsl.conrad.utils.ImageUtil
multiplyInnerProd(SimpleVector, SimpleVector) - Static method in class edu.stanford.rsl.conrad.numerics.SimpleOperators: Computes the inner product multiplication (dot product) of v1 and v2.
multiplyMatrixProd(SimpleMatrix, SimpleMatrix) - Static method in class edu.stanford.rsl.conrad.numerics.SimpleOperators: Computes the product of two matrices
multiplyOuterProd(SimpleVector, SimpleVector) - Static method in class edu.stanford.rsl.conrad.numerics.SimpleOperators: Computes the outer product multiplication of v1 and v2; i.e v1 x v2
multiplyScalar(Volume3D, float, float) - Method in class edu.stanford.rsl.conrad.cuda.CUDAVolumeOperator
multiplyScalar(Volume3D, float, float) - Method in class edu.stanford.rsl.conrad.volume3d.ParallelVolumeOperator
multiplyScalar(Volume3D, float, float) - Method in class edu.stanford.rsl.conrad.volume3d.VolumeOperator: Multiplies the volume by a scalar.
MultiplySlabs - Class in edu.stanford.rsl.conrad.volume3d.operations
MultiplySlabs() - Constructor for class edu.stanford.rsl.conrad.volume3d.operations.MultiplySlabs
MultiplySlabScalar - Class in edu.stanford.rsl.conrad.volume3d.operations
MultiplySlabScalar() - Constructor for class edu.stanford.rsl.conrad.volume3d.operations.MultiplySlabScalar
MultiProjectionFilter - Class in edu.stanford.rsl.conrad.filtering.multiprojection: Abstract class to handle multi projection filter.
MultiProjectionFilter() - Constructor for class edu.stanford.rsl.conrad.filtering.multiprojection.MultiProjectionFilter
MultiSweepTrajectory - Class in edu.stanford.rsl.conrad.geometry.trajectories
MultiSweepTrajectory(Trajectory) - Constructor for class edu.stanford.rsl.conrad.geometry.trajectories.MultiSweepTrajectory
myFileChoose(String, boolean) - Static method in class edu.stanford.rsl.conrad.utils.FileUtil: Wrapper for the Swing FileChooser.

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