- TEFLON_mdensity - Static variable in class edu.stanford.rsl.conrad.physics.Constants
-
Teflon mass density 2.250E+00 (g/cm3)
- TeflonCTValue - Static variable in class edu.stanford.rsl.conrad.physics.Constants
-
- teflonEnergies - Static variable in class edu.stanford.rsl.conrad.physics.EnergyDependentCoefficients
-
Deprecated.
Energies [Mev] at which the coefficients were meassured.
- teflonMuEnOverRho - Static variable in class edu.stanford.rsl.conrad.physics.EnergyDependentCoefficients
-
Deprecated.
mass energy-absorption coefficient (mu_\text{en}/rho) in [cm^2/g]
- teflonMuOverRho - Static variable in class edu.stanford.rsl.conrad.physics.EnergyDependentCoefficients
-
Deprecated.
Photon mass attenuation coefficients (mu/rho) in [cm^2/g]
- terminate() - Method in class edu.stanford.rsl.conrad.volume3d.MaxEigenValue
-
- TESSELATE_COMPOUND_OF_COMPOUND_SHAPES - Static variable in class edu.stanford.rsl.conrad.geometry.splines.SurfaceBSpline
-
- TESSELATE_COMPOUND_OF_OCTREES - Static variable in class edu.stanford.rsl.conrad.geometry.splines.SurfaceBSpline
-
- TESSELATE_COMPOUND_SHAPE - Static variable in class edu.stanford.rsl.conrad.geometry.splines.SurfaceBSpline
-
- TESSELATE_LINEAR_OCTREE - Static variable in class edu.stanford.rsl.conrad.geometry.splines.SurfaceBSpline
-
- TESSELATE_NESTED_OCTREE - Static variable in class edu.stanford.rsl.conrad.geometry.splines.SurfaceBSpline
-
- tesselateSplines(double, double) - Method in class edu.stanford.rsl.conrad.geometry.splines.SurfaceBSplineVolumePhantom
-
- tessellate(double) - Method in class edu.stanford.rsl.conrad.geometry.AbstractSurface
-
Creates a list of connected triangles that can be used to approximate the object.
- tessellate(double) - Method in class edu.stanford.rsl.conrad.geometry.shapes.ArbitrarySurface
-
- tessellate(double) - Method in class edu.stanford.rsl.conrad.geometry.shapes.simple.Box
-
- tessellate(double) - Method in class edu.stanford.rsl.conrad.geometry.shapes.simple.Cone
-
- tessellate(double) - Method in class edu.stanford.rsl.conrad.geometry.shapes.simple.Cylinder
-
- tessellate(double) - Method in class edu.stanford.rsl.conrad.geometry.shapes.simple.Ellipsoid
-
- tessellate(double) - Method in class edu.stanford.rsl.conrad.geometry.shapes.simple.Plane3D
-
- tessellate(double) - Method in class edu.stanford.rsl.conrad.geometry.shapes.simple.Sphere
-
- tessellate(double) - Method in class edu.stanford.rsl.conrad.geometry.splines.SurfaceBSpline
-
- tessellate(double) - Method in class edu.stanford.rsl.conrad.geometry.splines.TimeVariantSurfaceBSpline
-
- tessellateMesh(double, double) - Method in class edu.stanford.rsl.conrad.geometry.splines.SurfaceBSpline
-
Tesselates the BSplineSurface into a mesh of Triangles.
- tessellateMesh(double, double, int) - Method in class edu.stanford.rsl.conrad.geometry.splines.SurfaceBSpline
-
Tesselates the BSplineSurface into a mesh of Triangles.
- tessellateMesh(double, double, double) - Method in class edu.stanford.rsl.conrad.geometry.splines.TimeVariantSurfaceBSpline
-
- tessellatePhantom(double) - Method in class edu.stanford.rsl.conrad.phantom.AnalyticPhantom
-
- tessellateScene(double, double, double, double, double, double) - Method in class edu.stanford.rsl.conrad.phantom.xcat.CombinedBreathingHeartScene
-
- tessellateScene(double, double, double, double, double, double) - Method in class edu.stanford.rsl.conrad.phantom.xcat.CoronaryScene
-
- tessellateScene(double, double, double, double, double, double) - Method in class edu.stanford.rsl.conrad.phantom.xcat.HeartScene
-
- tessellateScene(double, double, double, double, double, double) - Method in class edu.stanford.rsl.conrad.phantom.xcat.WholeBodyScene
-
- tessellateScene(double, double, double, double, double, double) - Method in class edu.stanford.rsl.conrad.phantom.xcat.XCatScene
-
This definition of XCat does tessellate the scene, i.e.
- tessellateSceneFixedUVSampling(int, int, double) - Method in class edu.stanford.rsl.conrad.phantom.xcat.HeartScene
-
- TessellationThread - Class in edu.stanford.rsl.conrad.phantom.xcat
-
Thread to tessellate a SurfaceBSpline or TimeVariantSurfaceBSpline.
- TessellationThread(Object, double, double, double, double, double, double, double, double) - Constructor for class edu.stanford.rsl.conrad.phantom.xcat.TessellationThread
-
- TessellationUtil - Class in edu.stanford.rsl.conrad.utils
-
- TessellationUtil() - Constructor for class edu.stanford.rsl.conrad.utils.TessellationUtil
-
- testAbs() - Method in class edu.stanford.rsl.conrad.cuda.CUDAVolumeTest
-
- testAddScalar() - Method in class edu.stanford.rsl.conrad.cuda.CUDAVolumeTest
-
- testAddVolume() - Method in class edu.stanford.rsl.conrad.cuda.CUDAVolumeTest
-
- testAddVolumeWeight() - Method in class edu.stanford.rsl.conrad.cuda.CUDAVolumeTest
-
- testAEC2() - Static method in class edu.stanford.rsl.apps.Testing
-
- TestAffineTransform - Class in edu.stanford.rsl.conrad.geometry.transforms.test
-
- TestAffineTransform() - Constructor for class edu.stanford.rsl.conrad.geometry.transforms.test.TestAffineTransform
-
- testArbitraryMaterial(String, AttenuationType, int, int) - Static method in class edu.stanford.rsl.conrad.physics.materials.materialsTest.TestMassAttenuationData
-
CompareCompare local and online mass attenuation values of arbitrarily defined material
- testArbitraryMaterial(WeightedAtomicComposition, AttenuationType, int, int) - Static method in class edu.stanford.rsl.conrad.physics.materials.materialsTest.TestMassAttenuationData
-
CompareCompare local and online mass attenuation values of arbitrarily defined material
- TestBob - Class in edu.stanford.rsl.apps
-
- TestBob() - Constructor for class edu.stanford.rsl.apps.TestBob
-
- testBoxIntersection45DegreeRotationAndShift() - Method in class edu.stanford.rsl.conrad.geometry.shapes.simple.GeometryTests
-
- testBoxIntersection90DegreeRotation() - Method in class edu.stanford.rsl.conrad.geometry.shapes.simple.GeometryTests
-
- testBoxIntersection90DegreeRotationAndShift() - Method in class edu.stanford.rsl.conrad.geometry.shapes.simple.GeometryTests
-
- testBoxIntersectionAndShift() - Method in class edu.stanford.rsl.conrad.geometry.shapes.simple.GeometryTests
-
- testBoxIntersectionRotationAndShift() - Method in class edu.stanford.rsl.conrad.geometry.shapes.simple.GeometryTests
-
- testBoxIntersectionRotationAndShiftXYZ() - Method in class edu.stanford.rsl.conrad.geometry.shapes.simple.GeometryTests
-
- testBoxIntersectionSimple() - Method in class edu.stanford.rsl.conrad.geometry.shapes.simple.GeometryTests
-
- testCLVersion() - Method in class edu.stanford.rsl.conrad.opencl.TestOpenCL
-
- TestComboTransform - Class in edu.stanford.rsl.conrad.geometry.transforms.test
-
- TestComboTransform() - Constructor for class edu.stanford.rsl.conrad.geometry.transforms.test.TestComboTransform
-
- testCompoundShapeIntersection() - Method in class edu.stanford.rsl.conrad.geometry.shapes.simple.GeometryTests
-
- testCompoundShapeIntersection45DegreeRotation() - Method in class edu.stanford.rsl.conrad.geometry.shapes.simple.GeometryTests
-
- testCompoundShapeIntersection45DegreeRotationAndShift() - Method in class edu.stanford.rsl.conrad.geometry.shapes.simple.GeometryTests
-
- testCompoundShapeIntersection90DegreeRotation() - Method in class edu.stanford.rsl.conrad.geometry.shapes.simple.GeometryTests
-
- testComputeCameraCenter() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testComputeDepth() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testComputeGLMatricesIntIntIntIntAbstractVectorAbstractVectorDoubleArrayDoubleArray() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testComputeGLMatricesIntIntIntIntDoubleDoubleDoubleArrayDoubleArray() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testComputeOffset() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testComputeP() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testComputePrincipalAxis() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testComputeRayDirection() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testComputeSourceToDetectorDistance() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- TestComputeWeights() - Method in class edu.stanford.rsl.conrad.opencl.TestOpenCL
-
- testConstrainedRANSAC() - Method in class edu.stanford.rsl.conrad.fitting.test.FunctionTest
-
Here we test constrained RANSAC.
- testConv() - Static method in class edu.stanford.rsl.apps.Testing
-
- testConvexHull2D() - Method in class edu.stanford.rsl.conrad.geometry.test.GeometryTests
-
- testConvexHull3D() - Method in class edu.stanford.rsl.conrad.geometry.test.GeometryTests
-
- TestCPURayTracer() - Method in class edu.stanford.rsl.conrad.opencl.TestOpenCL
-
- testCreateHighPassFilter() - Method in class edu.stanford.rsl.conrad.cuda.CUDAVolumeTest
-
- testCreateLowPassFilter() - Method in class edu.stanford.rsl.conrad.cuda.CUDAVolumeTest
-
- testCreateVolume() - Method in class edu.stanford.rsl.conrad.cuda.CUDAVolumeTest
-
- testDeterminant() - Method in class edu.stanford.rsl.conrad.numerics.test.SimpleMatrixTest
-
- testDivideByVolume() - Method in class edu.stanford.rsl.conrad.cuda.CUDAVolumeTest
-
- testDivideScalar() - Method in class edu.stanford.rsl.conrad.cuda.CUDAVolumeTest
-
- TestExpressions - Class in edu.stanford.rsl.conrad.numerics.test
-
Class for testing the accuracy of expressions class
- TestExpressions() - Constructor for class edu.stanford.rsl.conrad.numerics.test.TestExpressions
-
- testFFT1D() - Method in class edu.stanford.rsl.conrad.data.test.FFTTests
-
- testFFTShift() - Method in class edu.stanford.rsl.conrad.cuda.CUDAVolumeTest
-
- testfilt_cos2_quad() - Method in class edu.stanford.rsl.conrad.cuda.CUDAVolumeTest
-
- testfilt_cos2r() - Method in class edu.stanford.rsl.conrad.cuda.CUDAVolumeTest
-
- testfilt_cos2r_quad() - Method in class edu.stanford.rsl.conrad.cuda.CUDAVolumeTest
-
- testfilt_gauss() - Method in class edu.stanford.rsl.conrad.cuda.CUDAVolumeTest
-
- testfilt_solve_max_eigenValue() - Method in class edu.stanford.rsl.conrad.cuda.CUDAVolumeTest
-
- testGetPrincipalPoint() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testGetRt() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testGetSubMatrix() - Method in class edu.stanford.rsl.conrad.numerics.test.SimpleMatrixTest
-
- testGetViewingDirection() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testGrayValueComparison() - Static method in class edu.stanford.rsl.apps.Testing
-
- Testing - Class in edu.stanford.rsl.apps
-
- Testing() - Constructor for class edu.stanford.rsl.apps.Testing
-
- TestingTools - Class in edu.stanford.rsl.conrad.utils
-
- TestingTools() - Constructor for class edu.stanford.rsl.conrad.utils.TestingTools
-
- testIntersectRayWithCuboid() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testInverseQR() - Method in class edu.stanford.rsl.conrad.numerics.test.SimpleOperatorsTest
-
- testInverseRt2D() - Method in class edu.stanford.rsl.conrad.numerics.test.SimpleOperatorsTest
-
- testInverseRt3D() - Method in class edu.stanford.rsl.conrad.numerics.test.SimpleOperatorsTest
-
- testInverseUpperTriangular() - Method in class edu.stanford.rsl.conrad.numerics.test.SimpleOperatorsTest
-
- testIsoCenterComputation() - Method in class edu.stanford.rsl.conrad.geometry.test.GeometryTests
-
- TestJang - Class in edu.stanford.rsl.apps
-
Generate random integers in a certain range.
- TestJang() - Constructor for class edu.stanford.rsl.apps.TestJang
-
- testKnownMaterials(Material, AttenuationType, int, int) - Static method in class edu.stanford.rsl.conrad.physics.materials.materialsTest.TestMassAttenuationData
-
Compare local and online mass attenuation values of know materials
- TestMassAttenuationData - Class in edu.stanford.rsl.conrad.physics.materials.materialsTest
-
Class for comparing the results from local mass attenuation calculator with online mass attenuation calculation from XCOM
- TestMassAttenuationData() - Constructor for class edu.stanford.rsl.conrad.physics.materials.materialsTest.TestMassAttenuationData
-
- testMax() - Method in class edu.stanford.rsl.conrad.cuda.CUDAVolumeTest
-
- testMean() - Method in class edu.stanford.rsl.conrad.cuda.CUDAVolumeTest
-
- testMin() - Method in class edu.stanford.rsl.conrad.cuda.CUDAVolumeTest
-
- TestObject1 - Class in edu.stanford.rsl.tutorial.phantoms
-
Simple class to show the Grid2D functionality.
- TestObject1(int, int) - Constructor for class edu.stanford.rsl.tutorial.phantoms.TestObject1
-
The constructor takes two arguments to initialize the grid.
- TestObject2 - Class in edu.stanford.rsl.tutorial.phantoms
-
Simple class to show the Grid2D functionality.
- TestObject2(int, int) - Constructor for class edu.stanford.rsl.tutorial.phantoms.TestObject2
-
The constructor takes two arguments to initialize the grid.
- TestOpenCL - Class in edu.stanford.rsl.conrad.opencl
-
- TestOpenCL() - Constructor for class edu.stanford.rsl.conrad.opencl.TestOpenCL
-
- TestOpenCLCylinder() - Method in class edu.stanford.rsl.conrad.opencl.TestOpenCL
-
- TestOpenCLSimpleObjectRenderingAppendBuffer() - Method in class edu.stanford.rsl.conrad.opencl.TestOpenCL
-
- TestOpenCLSphere() - Method in class edu.stanford.rsl.conrad.opencl.TestOpenCL
-
- TestOpenCLSurfaceBSplineProjection() - Method in class edu.stanford.rsl.conrad.opencl.TestOpenCL
-
- TestOpenCLSurfaceBSplineRendering() - Method in class edu.stanford.rsl.conrad.opencl.TestOpenCL
-
- TestOpenCLSurfaceBSplineRenderingAppendBuffer() - Method in class edu.stanford.rsl.conrad.opencl.TestOpenCL
-
- TestOpenCLSurfaceBSplineRenderingRayCast() - Method in class edu.stanford.rsl.conrad.opencl.TestOpenCL
-
- TestOpenCLSurfaceBSplineRenderingYBuffer() - Method in class edu.stanford.rsl.conrad.opencl.TestOpenCL
-
- TestOpenCLSurfaceBSplineRenderingZBuffer() - Method in class edu.stanford.rsl.conrad.opencl.TestOpenCL
-
- TestOpenCLTextureTimeSurfaceBSpline() - Method in class edu.stanford.rsl.conrad.opencl.TestOpenCL
-
- TestOpenCLUniformBSpline() - Method in class edu.stanford.rsl.conrad.opencl.TestOpenCL
-
- TestOpenCLUniformSurfaceBSpline() - Method in class edu.stanford.rsl.conrad.opencl.TestOpenCL
-
- TestOpenCLUniformTextureBSpline() - Method in class edu.stanford.rsl.conrad.opencl.TestOpenCL
-
- TestOpenCLUniformTextureSurfaceBSpline() - Method in class edu.stanford.rsl.conrad.opencl.TestOpenCL
-
- TestOpenCLUniformTimeSurfaceBSpline() - Method in class edu.stanford.rsl.conrad.opencl.TestOpenCL
-
- testParkerWeighting() - Static method in class edu.stanford.rsl.apps.Testing
-
- testPipeline() - Method in class edu.stanford.rsl.conrad.pipeline.PipelineTests
-
- testPlaneModel() - Method in class edu.stanford.rsl.conrad.opencl.TestOpenCL
-
- testProject() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testProjection() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testProjectionAbstractMatrix() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testProjectionDoubleArrayDoubleArrayIntArray() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testProjectionSource() - Method in class edu.stanford.rsl.conrad.io.DennerleinProjectionSource
-
- testProjectionSource() - Method in class edu.stanford.rsl.conrad.io.DicomProjectionSource
-
- testProjectionSource() - Method in class edu.stanford.rsl.conrad.io.TiffProjectionSource
-
- testRampFilter() - Static method in class edu.stanford.rsl.apps.Testing
-
- testRandomVolume() - Method in class edu.stanford.rsl.conrad.cuda.CUDAVolumeTest
-
- testRANSAC() - Method in class edu.stanford.rsl.conrad.fitting.test.FunctionTest
-
Here we test RANSAC.
- testRQ() - Method in class edu.stanford.rsl.conrad.numerics.test.RQTest
-
- TestScaleRotate - Class in edu.stanford.rsl.conrad.geometry.transforms.test
-
- TestScaleRotate() - Constructor for class edu.stanford.rsl.conrad.geometry.transforms.test.TestScaleRotate
-
- testSetFromGL() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetFromP() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetFromPSingularMatrix() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetFromPWrongSizeMatrix() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetK() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetKFromDistancesSpacingsSizeOffset() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetKFromDistancesSpacingsSizeOffsetDirNotPmOne() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetKFromDistancesSpacingsSizeOffsetNonPosDist() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetKFromDistancesSpacingsSizeOffsetNonPosSpacingU() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetKFromDistancesSpacingsSizeOffsetNonPosSpacingV() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetKFromDistancesSpacingsSizeOffsetWrongSize1() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetKFromDistancesSpacingsSizeOffsetWrongSize2() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetKFromDistancesSpacingsSizeOffsetWrongSize3() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetKNonTriangular10() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetKNonTriangular20() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetKNonTriangular21() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetKWrongDiag0() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetKWrongDiag1() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetKWrongDiag2() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetKWrongSize() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetPrincipalPoint() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetPrincipalPointWrongSize() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetR() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetRNonSOButO() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetRt() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetRtFromCircularTrajectory1() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetRtFromCircularTrajectory2() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetRtFromCircularTrajectoryCenterToCameraAtZeroAngleNull() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetRtFromCircularTrajectoryNonPosRadius() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetRtFromCircularTrajectoryRotationAxisNull() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetRtFromCircularTrajectoryUVDirection1() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetRtFromCircularTrajectoryUVDirection2() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetRtNonSOButO() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetRtWrongLastRow0() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetRtWrongLastRow1() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetRtWrongLastRow2() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetRtWrongLastRow3() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetRWrongSize() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetS() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetSKRT() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetSNonPositive() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetT() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetToExampleCamera() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetTWrongSize() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetViewingDirection() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSetViewingDirectionNotPmOne() - Method in class edu.stanford.rsl.conrad.geometry.test.ProjectionTest
-
- testSink() - Method in class edu.stanford.rsl.conrad.pipeline.PipelineTests
-
- testSolveLinearLeastSquares() - Method in class edu.stanford.rsl.conrad.numerics.test.SolversTest
-
- testSolveLowerTriangular() - Method in class edu.stanford.rsl.conrad.numerics.test.SolversTest
-
- testSolveLSE() - Method in class edu.stanford.rsl.conrad.numerics.test.SolversTest
-
- testSolveUpperTriangular() - Method in class edu.stanford.rsl.conrad.numerics.test.SolversTest
-
- testToStringAndFromString() - Method in class edu.stanford.rsl.conrad.numerics.test.SimpleMatrixTest
-
- testToStringAndFromString() - Method in class edu.stanford.rsl.conrad.numerics.test.SimpleVectorTest
-
- TestTranslation - Class in edu.stanford.rsl.conrad.geometry.transforms.test
-
- TestTranslation() - Constructor for class edu.stanford.rsl.conrad.geometry.transforms.test.TestTranslation
-
- TestVectorAdd() - Method in class edu.stanford.rsl.conrad.opencl.TestOpenCL
-
- TF_Re - Static variable in class edu.stanford.rsl.conrad.physics.Constants
-
W target fraction Rhenium
- TF_W - Static variable in class edu.stanford.rsl.conrad.physics.Constants
-
W target fraction Tungsten
- ThinPlateSplineInterpolation - Class in edu.stanford.rsl.tutorial.motionEstimation
-
This class provides methods to interpolate scattered data of any dimension
using a thin plate spline.
- ThinPlateSplineInterpolation(int, ArrayList<PointND>, ArrayList<PointND>) - Constructor for class edu.stanford.rsl.tutorial.motionEstimation.ThinPlateSplineInterpolation
-
- ThinPlateSplinesBasedProjectionWarpingTool - Class in edu.stanford.rsl.conrad.filtering
-
- ThinPlateSplinesBasedProjectionWarpingTool() - Constructor for class edu.stanford.rsl.conrad.filtering.ThinPlateSplinesBasedProjectionWarpingTool
-
- ThinPlateSplinesBasedProjectionWarpingToolForXCAT - Class in edu.stanford.rsl.conrad.filtering
-
- ThinPlateSplinesBasedProjectionWarpingToolForXCAT() - Constructor for class edu.stanford.rsl.conrad.filtering.ThinPlateSplinesBasedProjectionWarpingToolForXCAT
-
- threshold(int) - Method in class edu.stanford.rsl.conrad.io.SerializableFloatProcessor
-
Not implemented.
- thresholdImage(ImageProcessor, double) - Static method in class edu.stanford.rsl.conrad.geometry.General
-
Threshold image and create binary mask
- thresholdStack(ImagePlus, double) - Static method in class edu.stanford.rsl.apps.gui.blobdetection.AutomaticMarkerDetectionWorker
-
Threshold stack and create binary masks
- Ti_mdensity - Static variable in class edu.stanford.rsl.conrad.physics.Constants
-
Titanium mass density 4.540E+00 (g/cm3)
- TiffProjectionSource - Class in edu.stanford.rsl.conrad.io
-
Wrapper for a tif reader using imageJ.
- TiffProjectionSource() - Constructor for class edu.stanford.rsl.conrad.io.TiffProjectionSource
-
- TimeLinePlot - Class in edu.stanford.rsl.apps.gui
-
- TimeLinePlot() - Constructor for class edu.stanford.rsl.apps.gui.TimeLinePlot
-
- timesComplexNumber(double[], double, double) - Static method in class edu.stanford.rsl.conrad.utils.FFTUtil
-
Multiplies the array with the complex number defined as two double values;
- TimeVariantSurfaceBSpline - Class in edu.stanford.rsl.conrad.geometry.splines
-
- TimeVariantSurfaceBSpline(ArrayList<SurfaceBSpline>) - Constructor for class edu.stanford.rsl.conrad.geometry.splines.TimeVariantSurfaceBSpline
-
- TimeVariantSurfaceBSpline(SurfaceBSpline, MotionField, int, boolean) - Constructor for class edu.stanford.rsl.conrad.geometry.splines.TimeVariantSurfaceBSpline
-
- TimeVariantSurfaceBSplineListMotionField - Class in edu.stanford.rsl.conrad.geometry.motion
-
Parzen-interpolating motion field.
- TimeVariantSurfaceBSplineListMotionField(ArrayList<TimeVariantSurfaceBSpline>, double) - Constructor for class edu.stanford.rsl.conrad.geometry.motion.TimeVariantSurfaceBSplineListMotionField
-
- TimeVariantSurfaceBSplineMotionField - Class in edu.stanford.rsl.conrad.geometry.motion
-
ParzenWindowMotionField that uses the points from a TimeVarianSurfaceBSpline to create the motion information.
- TimeVariantSurfaceBSplineMotionField(TimeVariantSurfaceBSpline, double) - Constructor for class edu.stanford.rsl.conrad.geometry.motion.TimeVariantSurfaceBSplineMotionField
-
Contructor
- TimeWarper - Class in edu.stanford.rsl.conrad.geometry.motion.timewarp
-
TimeWarper is a class to warp time to match certain periodic, quasi-periodic, and non periodic behavior.
- TimeWarper() - Constructor for class edu.stanford.rsl.conrad.geometry.motion.timewarp.TimeWarper
-
- titaniumEnergies - Static variable in class edu.stanford.rsl.conrad.physics.EnergyDependentCoefficients
-
Deprecated.
Energies [Mev] at which the coefficients were meassured.
- titaniumMuEnOverRho - Static variable in class edu.stanford.rsl.conrad.physics.EnergyDependentCoefficients
-
Deprecated.
mass energy-absorption coefficient (mu_\text{en}/rho) in [cm^2/g]
- titaniumMuOverRho - Static variable in class edu.stanford.rsl.conrad.physics.EnergyDependentCoefficients
-
Deprecated.
Photon mass attenuation coefficients (mu/rho) in [cm^2/g]
- toArray() - Method in class edu.stanford.rsl.conrad.geometry.shapes.compound.CompoundShape
-
- toArray(T[]) - Method in class edu.stanford.rsl.conrad.geometry.shapes.compound.CompoundShape
-
- toArray() - Method in class edu.stanford.rsl.conrad.geometry.shapes.compound.LinearOctree
-
- toArray(T[]) - Method in class edu.stanford.rsl.conrad.geometry.shapes.compound.LinearOctree
-
- toArray() - Method in class edu.stanford.rsl.conrad.rendering.PrioritizableScene
-
- toArray(T[]) - Method in class edu.stanford.rsl.conrad.rendering.PrioritizableScene
-
- toArray() - Method in class edu.stanford.rsl.conrad.rendering.SimpleScene
-
- toArray(T[]) - Method in class edu.stanford.rsl.conrad.rendering.SimpleScene
-
- toArray() - Method in class edu.stanford.rsl.conrad.utils.ImageProcessorBuffer
-
Returns a sorted array of the buffered ImageProcessors
- toCUDAFormat(float[][][]) - Static method in class edu.stanford.rsl.conrad.cuda.CUDAFFTVolumeHandle
-
- toDegrees(double) - Static method in class edu.stanford.rsl.conrad.geometry.General
-
- toFloat(int, FloatProcessor) - Method in class edu.stanford.rsl.conrad.io.SerializableFloatProcessor
-
Returns this FloatProcessor.
- toFloat(SerializableFloatProcessor) - Method in class edu.stanford.rsl.conrad.io.SerializableFloatProcessor
-
Returns this FloatProcessor.
- toFloatProcessor(int, int) - Method in class edu.stanford.rsl.conrad.utils.BilinearInterpolatingDoubleArray
-
Renders a float processor of the 2-D array given the number of bins in x and y direction
- toHostFormat(float[], int[]) - Static method in class edu.stanford.rsl.conrad.cuda.CUDAFFTVolumeHandle
-
- toImagePlus(String) - Method in class edu.stanford.rsl.conrad.utils.ImageProcessorBuffer
-
Returns a sorted ImagePlus of the buffered ImageProcessors
- toRadians(double) - Static method in class edu.stanford.rsl.conrad.geometry.General
-
- toString() - Method in class edu.stanford.rsl.apps.gui.pointselector.PointSelectorWorker
-
- toString() - Method in class edu.stanford.rsl.apps.gui.roi.CompareGrayValues
-
- toString() - Method in class edu.stanford.rsl.apps.gui.roi.CopyROI
-
- toString() - Method in class edu.stanford.rsl.apps.gui.roi.DefineHounsfieldScaling
-
- toString() - Method in class edu.stanford.rsl.apps.gui.roi.EvaluateROI
-
- toString() - Method in class edu.stanford.rsl.apps.gui.roi.LearnHounsfieldScaling
-
- toString() - Method in class edu.stanford.rsl.apps.gui.roi.LinewiseFill
-
- toString() - Method in class edu.stanford.rsl.apps.gui.roi.Measure2DBeadMTFAngularRange
-
- toString() - Method in class edu.stanford.rsl.apps.gui.roi.Measure2DBeadMTFMultiDirection
-
- toString() - Method in class edu.stanford.rsl.apps.gui.roi.Measure3DBeadMTF
-
- toString() - Method in class edu.stanford.rsl.apps.gui.roi.MeasureEdgeMTF
-
- toString() - Method in class edu.stanford.rsl.apps.gui.roi.MeasureInlayMTF
-
- toString() - Method in class edu.stanford.rsl.apps.gui.roi.MeasureMTFDroege
-
- toString() - Method in class edu.stanford.rsl.apps.gui.roi.MeasureNoise
-
- toString() - Method in class edu.stanford.rsl.apps.gui.roi.MeasurePatternMTF
-
- toString() - Method in class edu.stanford.rsl.apps.gui.roi.MeasurePDS2BeadAccuracy
-
- toString() - Method in class edu.stanford.rsl.apps.gui.roi.MeasureSlantMTF
-
- toString() - Method in class edu.stanford.rsl.apps.gui.roi.VariableFramerateVisualizer
-
- toString() - Method in class edu.stanford.rsl.apps.gui.roi.ZeroFill
-
- toString() - Method in class edu.stanford.rsl.conrad.calibration.CalibrationBead
-
- toString() - Method in class edu.stanford.rsl.conrad.data.Complex
-
- toString() - Method in class edu.stanford.rsl.conrad.data.Grid
-
Serialize the grid's content to a String.
- toString() - Method in class edu.stanford.rsl.conrad.data.Grid1D
-
- toString() - Method in class edu.stanford.rsl.conrad.data.Grid2D
-
- toString() - Method in class edu.stanford.rsl.conrad.data.Grid2DComplex
-
- toString() - Method in class edu.stanford.rsl.conrad.data.Grid3D
-
- toString() - Method in class edu.stanford.rsl.conrad.filtering.ImageFilteringTool
-
returns getToolName();
- toString() - Method in class edu.stanford.rsl.conrad.filtering.rampfilters.RampFilter
-
- toString() - Method in class edu.stanford.rsl.conrad.fitting.Function
-
- toString() - Method in class edu.stanford.rsl.conrad.fitting.GaussianFunction
-
- toString() - Method in class edu.stanford.rsl.conrad.fitting.IdentityFunction
-
- toString() - Method in class edu.stanford.rsl.conrad.fitting.LinearFunction
-
- toString() - Method in class edu.stanford.rsl.conrad.fitting.LogarithmicFunction
-
- toString() - Method in class edu.stanford.rsl.conrad.fitting.PolynomialFunction
-
- toString() - Method in class edu.stanford.rsl.conrad.fitting.Quadric
-
- toString() - Method in class edu.stanford.rsl.conrad.fitting.RANSACFittedFunction
-
- toString() - Method in class edu.stanford.rsl.conrad.fitting.Surface
-
- toString() - Method in class edu.stanford.rsl.conrad.geometry.Projection
-
Returns a String representation of this projection's 3x4 matrix.
- toString() - Method in class edu.stanford.rsl.conrad.geometry.shapes.compound.CompoundShape
-
- toString() - Method in class edu.stanford.rsl.conrad.geometry.shapes.compound.LinearOctree
-
- toString() - Method in class edu.stanford.rsl.conrad.geometry.shapes.simple.Edge
-
- toString() - Method in class edu.stanford.rsl.conrad.geometry.shapes.simple.PointND
-
- toString() - Method in class edu.stanford.rsl.conrad.geometry.shapes.simple.StraightLine
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- toString() - Method in class edu.stanford.rsl.conrad.geometry.shapes.simple.Triangle
-
- toString() - Method in class edu.stanford.rsl.conrad.io.ImagePlusDataSink
-
- toString() - Method in class edu.stanford.rsl.conrad.io.IndividualFilesProjectionDataSink
-
- toString() - Method in class edu.stanford.rsl.conrad.metric.ImageMetric
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- toString() - Method in class edu.stanford.rsl.conrad.metric.MeanSquareErrorMetric
-
- toString() - Method in class edu.stanford.rsl.conrad.metric.NormalizedImprovement
-
- toString() - Method in class edu.stanford.rsl.conrad.metric.RootMeanSquareErrorMetric
-
- toString() - Method in class edu.stanford.rsl.conrad.numerics.mathexpressions.AbstractMathExpression
-
Converts a mathematical expression an equivalent string literal
- toString() - Method in class edu.stanford.rsl.conrad.numerics.mathexpressions.CompoundExpression
-
- toString() - Method in class edu.stanford.rsl.conrad.numerics.mathexpressions.FloatExpression
-
- toString() - Method in class edu.stanford.rsl.conrad.numerics.mathexpressions.FunctionExpression
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- toString() - Method in class edu.stanford.rsl.conrad.numerics.mathexpressions.IdentifierExpression
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- toString() - Method in class edu.stanford.rsl.conrad.numerics.mathexpressions.MathExpression
-
- toString() - Method in class edu.stanford.rsl.conrad.numerics.mathexpressions.RealExpression
-
- toString() - Method in class edu.stanford.rsl.conrad.numerics.SimpleMatrix
-
- toString() - Method in class edu.stanford.rsl.conrad.numerics.SimpleVector
-
- toString() - Method in class edu.stanford.rsl.conrad.opencl.OpenCLProjectionPhantomRenderer
-
- toString() - Method in class edu.stanford.rsl.conrad.phantom.AnalyticPhantom
-
- toString() - Method in class edu.stanford.rsl.conrad.phantom.electrondensity.Insert
-
- toString() - Method in class edu.stanford.rsl.conrad.phantom.renderer.AnalyticPhantomProjector
-
- toString() - Method in class edu.stanford.rsl.conrad.phantom.renderer.CylinderPhantomRenderer
-
- toString() - Method in class edu.stanford.rsl.conrad.phantom.renderer.MetricPhantomRenderer
-
- toString() - Method in class edu.stanford.rsl.conrad.phantom.renderer.ParallelProjectionPhantomRenderer
-
- toString() - Method in class edu.stanford.rsl.conrad.phantom.renderer.PhantomRenderer
-
Returns the name of the phantom
- toString() - Method in class edu.stanford.rsl.conrad.phantom.renderer.RampProjectionPhantomRenderer
-
- toString() - Method in class edu.stanford.rsl.conrad.phantom.renderer.SliceParallelVolumePhantomRenderer
-
- toString() - Method in class edu.stanford.rsl.conrad.phantom.workers.DiracProjectionPhantom
-
- toString() - Method in class edu.stanford.rsl.conrad.phantom.workers.SliceWorker
-
- toString() - Method in class edu.stanford.rsl.conrad.physics.absorption.AbsorptionModel
-
- toString() - Method in class edu.stanford.rsl.conrad.physics.absorption.MonochromaticAbsorptionModel
-
- toString() - Method in class edu.stanford.rsl.conrad.physics.absorption.PolychromaticAbsorptionModel
-
- toString() - Method in class edu.stanford.rsl.conrad.physics.materials.Material
-
- toString() - Method in class edu.stanford.rsl.conrad.pipeline.BufferedProjectionSink
-
- toString(double[]) - Static method in class edu.stanford.rsl.conrad.utils.DoubleArrayUtil
-
Converts the array to a String representation.
- toString(double[], String) - Static method in class edu.stanford.rsl.conrad.utils.DoubleArrayUtil
-
Converts the array to a String representation.
- toString(float[]) - Static method in class edu.stanford.rsl.conrad.utils.FloatArrayUtil
-
Converts the array to a String representation.
- toString(float[], String) - Static method in class edu.stanford.rsl.conrad.utils.FloatArrayUtil
-
Converts the array to a String representation.
- Trajectory - Class in edu.stanford.rsl.conrad.geometry.trajectories
-
- Trajectory(Trajectory) - Constructor for class edu.stanford.rsl.conrad.geometry.trajectories.Trajectory
-
Copy Constructor that reads the values of another Trajectory object.
- Trajectory() - Constructor for class edu.stanford.rsl.conrad.geometry.trajectories.Trajectory
-
- TrajectoryEditor - Class in edu.stanford.rsl.apps.gui
-
This code was edited or generated using CloudGarden's Jigloo
SWT/Swing GUI Builder, which is free for non-commercial
use.
- TrajectoryEditor() - Constructor for class edu.stanford.rsl.apps.gui.TrajectoryEditor
-
- TrajectoryParkerWeightingTool - Class in edu.stanford.rsl.conrad.filtering.redundancy
-
This version of the Parker weights computes the primary angles from the trajectory rather than from preconfigured "primaryAngles".
- TrajectoryParkerWeightingTool() - Constructor for class edu.stanford.rsl.conrad.filtering.redundancy.TrajectoryParkerWeightingTool
-
- transform(PointND) - Method in class edu.stanford.rsl.conrad.geometry.transforms.ComboTransform
-
- transform(SimpleVector) - Method in class edu.stanford.rsl.conrad.geometry.transforms.ComboTransform
-
- transform(PointND) - Method in class edu.stanford.rsl.conrad.geometry.transforms.ScaleRotate
-
Applies scale-rotate transformation on a given point
- transform(SimpleVector) - Method in class edu.stanford.rsl.conrad.geometry.transforms.ScaleRotate
-
Applies scale-rotate transformation on a given direction
- Transform - Class in edu.stanford.rsl.conrad.geometry.transforms
-
- Transform() - Constructor for class edu.stanford.rsl.conrad.geometry.transforms.Transform
-
- transform(PointND) - Method in class edu.stanford.rsl.conrad.geometry.transforms.Transform
-
Transforms the given point and returns a new transformed point.
- transform(SimpleVector) - Method in class edu.stanford.rsl.conrad.geometry.transforms.Transform
-
Transforms the given vector
- transform(PointND) - Method in class edu.stanford.rsl.conrad.geometry.transforms.Translation
-
Applies the vector equivalent of a translation matrix on a given point.
- transform(SimpleVector) - Method in class edu.stanford.rsl.conrad.geometry.transforms.Translation
-
Since directions are not altered by translation, this method returns a given input unaltered.
- Transformable - Interface in edu.stanford.rsl.conrad.geometry.transforms
-
Interface for all Objects which can be transformed by Transforms.
- transformForward() - Method in class edu.stanford.rsl.conrad.data.Grid1DComplex
-
- transformForward() - Method in class edu.stanford.rsl.conrad.data.Grid2DComplex
-
- transformInverse() - Method in class edu.stanford.rsl.conrad.data.Grid1DComplex
-
- transformInverse() - Method in class edu.stanford.rsl.conrad.data.Grid2DComplex
-
- transformPoints(ArrayList<PointND>, Transform) - Static method in class edu.stanford.rsl.conrad.utils.DoublePrecisionPointUtil
-
Transforms a list of given points and returns them as new instances in a new list of points.
- translateTest() - Method in class edu.stanford.rsl.conrad.geometry.test.SurfaceTests
-
- Translation - Class in edu.stanford.rsl.conrad.geometry.transforms
-
This class decorates a translation vector.
- Translation(SimpleVector) - Constructor for class edu.stanford.rsl.conrad.geometry.transforms.Translation
-
Initialize a translation transform with a translation vector
- Translation(double...) - Constructor for class edu.stanford.rsl.conrad.geometry.transforms.Translation
-
Initialize a translation transform with a translation vector
- transpose() - Method in class edu.stanford.rsl.conrad.numerics.SimpleMatrix
-
Performs a matrix transpose in place.
- transposed() - Method in class edu.stanford.rsl.conrad.numerics.SimpleMatrix
-
- transposed() - Method in class edu.stanford.rsl.conrad.numerics.SimpleVector
-
- Triangle - Class in edu.stanford.rsl.conrad.geometry.shapes.simple
-
Class to describe a triangle in 3D.
- Triangle(PointND, PointND, PointND) - Constructor for class edu.stanford.rsl.conrad.geometry.shapes.simple.Triangle
-
Creates a new Triangle from the Points a, b, and c
- triangleIntersectionTest() - Method in class edu.stanford.rsl.conrad.geometry.test.SurfaceTests
-
- Triangulation - Class in edu.stanford.rsl.conrad.filtering.multiprojection
-
This class triangulates the 3D position from subsequent projections.
- Triangulation() - Constructor for class edu.stanford.rsl.conrad.filtering.multiprojection.Triangulation
-
- trilinear(ImagePlus, double, double, double) - Method in class edu.stanford.rsl.apps.gui.roi.Measure3DBeadMTF
-
Trilinear Interpolation in an ImagePlus.
Adopted from Volume Viewer by Kai Uwe Barthel: barthel (at) fhtw-berlin.de
This method is initialized in the first call with the volume dimensions to save computation time.
If this interpolation method is used from somewhere else, please use this method only on volumes of the same dimension.
- TruncationCorrectionTool - Class in edu.stanford.rsl.conrad.filtering
-
Class implements a simple truncation correction algorithm after
Ohnesorge, Flohr, Schwarz, Heiken, and Bae
"Efficient correction for CT image artifacts caused by objects extending outside the scan field of view"
Med.
- TruncationCorrectionTool() - Constructor for class edu.stanford.rsl.conrad.filtering.TruncationCorrectionTool
-
- twoOverThree - Static variable in class edu.stanford.rsl.conrad.geometry.splines.UniformCubicBSpline
-