edu.stanford.rsl.konrad.filtering
Class PoissonNoiseFilteringTool

java.lang.Object
  extended by edu.stanford.rsl.konrad.filtering.ImageFilteringTool
      extended by edu.stanford.rsl.konrad.filtering.IndividualImageFilteringTool
          extended by edu.stanford.rsl.konrad.filtering.PoissonNoiseFilteringTool
All Implemented Interfaces:
Citeable, GUIConfigurable, SafeSerializable, NamedParallelizableRunnable, ParallelizableRunnable, java.io.Serializable, java.lang.Cloneable, java.lang.Runnable
Direct Known Subclasses:
LogPoissonNoiseFilteringTool

public class PoissonNoiseFilteringTool
extends IndividualImageFilteringTool

Applies Poisson noise to the input image. The pixel-wise lambda is assumed to be the value of each input pixel.

Author:
Andreas Maier
See Also:
LogPoissonNoiseFilteringTool, Serialized Form

Constructor Summary
PoissonNoiseFilteringTool()
           
 
Method Summary
 ij.process.ImageProcessor applyToolToProcessor(ij.process.ImageProcessor imageProcessor)
          Is called in every thread to apply the tool to an individual ImageProcessor
 IndividualImageFilteringTool clone()
          All ImageFilteringTools need to be Cloneable in order to enable multiple processor usage.
 void configure()
          Configures the object before execution
 java.lang.String getBibtexCitation()
          Returns the citation in bibTex format
 java.lang.String getMedlineCitation()
          Returns the citation in Medline format
 java.lang.String getToolName()
          returns the name of the actual tool which was used.
 boolean isDeviceDependent()
          Cosine filtering depends on the projection geometry and is hence not device depdendent.
 void prepareForSerialization()
          Sets all data objects in the serialized object to null which do not implement the Serializable interface.
 
Methods inherited from class edu.stanford.rsl.konrad.filtering.IndividualImageFilteringTool
applyToolToProcessor, getFilteredImageProcessor, getImageIndex, getProcessName, run, setImageIndex, setImageProcessor, setLatch
 
Methods inherited from class edu.stanford.rsl.konrad.filtering.ImageFilteringTool
getFilterTools, isConfigured, setConfigured, toString
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, wait, wait, wait
 

Constructor Detail

PoissonNoiseFilteringTool

public PoissonNoiseFilteringTool()
Method Detail

clone

public IndividualImageFilteringTool clone()
Description copied from class: IndividualImageFilteringTool
All ImageFilteringTools need to be Cloneable in order to enable multiple processor usage.

Specified by:
clone in class IndividualImageFilteringTool

getToolName

public java.lang.String getToolName()
Description copied from class: ImageFilteringTool
returns the name of the actual tool which was used.

Specified by:
getToolName in class ImageFilteringTool
Returns:
the name of the tool as string.

applyToolToProcessor

public ij.process.ImageProcessor applyToolToProcessor(ij.process.ImageProcessor imageProcessor)
                                               throws java.lang.Exception
Description copied from class: IndividualImageFilteringTool
Is called in every thread to apply the tool to an individual ImageProcessor

Specified by:
applyToolToProcessor in class IndividualImageFilteringTool
Parameters:
imageProcessor - the ImageProcessor
Returns:
the filtered instance of the ImageProcessor
Throws:
java.lang.Exception

prepareForSerialization

public void prepareForSerialization()
Description copied from interface: SafeSerializable
Sets all data objects in the serialized object to null which do not implement the Serializable interface. It can also be used to save space in the serialized form. Configuration parameters are preserved. Processing data is discarded.

Specified by:
prepareForSerialization in interface SafeSerializable
Overrides:
prepareForSerialization in class IndividualImageFilteringTool

configure

public void configure()
               throws java.lang.Exception
Description copied from interface: GUIConfigurable
Configures the object before execution

Throws:
java.lang.Exception - may happen

getBibtexCitation

public java.lang.String getBibtexCitation()
Description copied from interface: Citeable
Returns the citation in bibTex format

Returns:
citation as String

getMedlineCitation

public java.lang.String getMedlineCitation()
Description copied from interface: Citeable
Returns the citation in Medline format

Returns:
citation as String

isDeviceDependent

public boolean isDeviceDependent()
Cosine filtering depends on the projection geometry and is hence not device depdendent.

Specified by:
isDeviceDependent in class ImageFilteringTool
Returns:
true if the method is device dependent.