edu.stanford.rsl.konrad.reconstruction
Class SubVolumeBackprojector

java.lang.Object
  extended by edu.stanford.rsl.konrad.filtering.ImageFilteringTool
      extended by edu.stanford.rsl.konrad.filtering.multiprojection.MultiProjectionFilter
          extended by edu.stanford.rsl.konrad.reconstruction.ReconstructionFilter
              extended by edu.stanford.rsl.konrad.reconstruction.FBPReconstructionFilter
                  extended by edu.stanford.rsl.konrad.reconstruction.VOIBasedReconstructionFilter
                      extended by edu.stanford.rsl.konrad.reconstruction.SubVolumeBackprojector
All Implemented Interfaces:
Citeable, GUIConfigurable, SafeSerializable, ProjectionSink, java.io.Serializable, java.lang.Cloneable, java.lang.Runnable

public class SubVolumeBackprojector
extends VOIBasedReconstructionFilter

This FBP-based mathod splits the reconstruction volume into sub volumes which can be processed in parallel to speed up the reconstruction further.

Author:
akmaier
See Also:
Serialized Form

Constructor Summary
SubVolumeBackprojector()
           
 
Method Summary
 void configure()
          Configures the object before execution
 java.lang.String getBibtexCitation()
          Returns the citation in bibTex format
 java.lang.String getMedlineCitation()
          Returns the citation in Medline format
 java.lang.String getName()
           
 java.lang.String getToolName()
          returns the name of the actual tool which was used.
 void initializeProjectionVolume()
          creates an empty projection volume.
 void prepareForSerialization()
          Sets all data objects in the serialized object to null which do not implement the Serializable interface.
 void process(ij.process.ImageProcessor img, int projectionNumber)
           
 
Methods inherited from class edu.stanford.rsl.konrad.reconstruction.VOIBasedReconstructionFilter
backproject, clone, close, isFastVOIMode, setConfiguration, setFastVOIMode, setMaxI, setMaximumVolumeOfInterest, setMaximumVolumeOfInterest
 
Methods inherited from class edu.stanford.rsl.konrad.reconstruction.FBPReconstructionFilter
isDeviceDependent
 
Methods inherited from class edu.stanford.rsl.konrad.reconstruction.ReconstructionFilter
applyHounsfieldScaling, getGeometry, setProjectionVolume, updateVolume
 
Methods inherited from class edu.stanford.rsl.konrad.filtering.multiprojection.MultiProjectionFilter
feedFilter, getContext, run, setContext, setShowStatus, setSink, start
 
Methods inherited from class edu.stanford.rsl.konrad.filtering.ImageFilteringTool
getFilterTools, isConfigured, setConfigured, toString
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, wait, wait, wait
 

Constructor Detail

SubVolumeBackprojector

public SubVolumeBackprojector()
Method Detail

getName

public java.lang.String getName()
Specified by:
getName in interface ProjectionSink
Overrides:
getName in class VOIBasedReconstructionFilter

configure

public void configure()
               throws java.lang.Exception
Description copied from interface: GUIConfigurable
Configures the object before execution

Specified by:
configure in interface GUIConfigurable
Overrides:
configure in class VOIBasedReconstructionFilter
Throws:
java.lang.Exception - may happen

initializeProjectionVolume

public void initializeProjectionVolume()
Description copied from class: ReconstructionFilter
creates an empty projection volume.

Overrides:
initializeProjectionVolume in class ReconstructionFilter

process

public void process(ij.process.ImageProcessor img,
                    int projectionNumber)
             throws java.lang.Exception
Specified by:
process in interface ProjectionSink
Overrides:
process in class MultiProjectionFilter
Throws:
java.lang.Exception

prepareForSerialization

public void prepareForSerialization()
Description copied from interface: SafeSerializable
Sets all data objects in the serialized object to null which do not implement the Serializable interface. It can also be used to save space in the serialized form. Configuration parameters are preserved. Processing data is discarded.

Specified by:
prepareForSerialization in interface SafeSerializable
Overrides:
prepareForSerialization in class VOIBasedReconstructionFilter

getBibtexCitation

public java.lang.String getBibtexCitation()
Description copied from interface: Citeable
Returns the citation in bibTex format

Specified by:
getBibtexCitation in interface Citeable
Overrides:
getBibtexCitation in class VOIBasedReconstructionFilter
Returns:
citation as String

getMedlineCitation

public java.lang.String getMedlineCitation()
Description copied from interface: Citeable
Returns the citation in Medline format

Specified by:
getMedlineCitation in interface Citeable
Overrides:
getMedlineCitation in class VOIBasedReconstructionFilter
Returns:
citation as String

getToolName

public java.lang.String getToolName()
Description copied from class: ImageFilteringTool
returns the name of the actual tool which was used.

Overrides:
getToolName in class VOIBasedReconstructionFilter
Returns:
the name of the tool as string.